Burkholderia cenocepacia J2315, BCAM1300 (pcaH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019619 3,4-dihydroxybenzoate catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03464
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0018578 protocatechuate 3,4-dioxygenase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03464
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008199 ferric iron binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00775
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00775
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF49482
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03464
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006725 cellular aromatic compound metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00775
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005506 iron ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03464
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj01220 Degradation of aromatic compounds 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj00362 Benzoate degradation 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00624 Polycyclic aromatic hydrocarbon degradation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bcj01120 Microbial metabolism in diverse environments 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj00624 Polycyclic aromatic hydrocarbon degradation 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00362 Benzoate degradation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc 4-sulfocatechol degradation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.60.130.10 IPR015889 Intradiol ring-cleavage dioxygenase, core 2 235 2.0E-83
SUPERFAMILY SSF49482 IPR015889 Intradiol ring-cleavage dioxygenase, core 6 234 1.11E-71
CDD cd03464 3,4-PCD_beta IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit 10 230 8.36555E-151
Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal 9 40 1.5E-13
ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal 79 107 -
Pfam PF00775 Dioxygenase IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal 47 227 9.1E-63
TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit 15 234 4.4E-109

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.