Burkholderia cenocepacia J2315, BCAM1207

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0042626	ATPase-coupled transmembrane transporter activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50929	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016021	integral component of membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50929	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50929	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016887	ATPase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00005	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50929	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bcj02010	ABC transporters	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00382		IPR003593	AAA+ ATPase domain	963	1149	1.5E-16
SUPERFAMILY	SSF90123		IPR036640	ABC transporter type 1, transmembrane domain superfamily	4	314	2.35E-46
SUPERFAMILY	SSF90123		IPR036640	ABC transporter type 1, transmembrane domain superfamily	613	926	1.44E-48
CDD	cd18585	ABC_6TM_CydC			679	915	2.60831E-31
Pfam	PF00664	ABC transporter transmembrane region	IPR011527	ABC transporter type 1, transmembrane domain	24	280	1.0E-17
CDD	cd18561	ABC_6TM_AarD_CydDC_like			30	309	3.82759E-60
ProSiteProfiles	PS50929	ABC transporter integral membrane type-1 fused domain profile.	IPR011527	ABC transporter type 1, transmembrane domain	19	298	34.022
ProSitePatterns	PS00211	ABC transporters family signature.	IPR017871	ABC transporter, conserved site	1075	1089	-
ProSiteProfiles	PS50893	ATP-binding cassette, ABC transporter-type domain profile.	IPR003439	ABC transporter-like	937	1172	23.116
Pfam	PF00005	ABC transporter	IPR003439	ABC transporter-like	955	1103	1.2E-31
Gene3D	G3DSA:3.40.50.300				931	1178	4.8E-89
ProSiteProfiles	PS50893	ATP-binding cassette, ABC transporter-type domain profile.	IPR003439	ABC transporter-like	334	569	21.922
ProSitePatterns	PS00211	ABC transporters family signature.	IPR017871	ABC transporter, conserved site	472	486	-
Pfam	PF00664	ABC transporter transmembrane region	IPR011527	ABC transporter type 1, transmembrane domain	662	876	3.6E-13
SMART	SM00382		IPR003593	AAA+ ATPase domain	360	546	4.6E-15
Gene3D	G3DSA:1.20.1560.10		IPR036640	ABC transporter type 1, transmembrane domain superfamily	612	921	2.6E-46
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	930	1173	7.46E-89
Pfam	PF00005	ABC transporter	IPR003439	ABC transporter-like	354	499	2.4E-31
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	327	570	3.24E-86
Gene3D	G3DSA:1.20.1560.10		IPR036640	ABC transporter type 1, transmembrane domain superfamily	4	319	1.4E-41
ProSiteProfiles	PS50929	ABC transporter integral membrane type-1 fused domain profile.	IPR011527	ABC transporter type 1, transmembrane domain	627	906	33.246
Gene3D	G3DSA:3.40.50.300				327	580	1.1E-84

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.