Burkholderia cenocepacia J2315, BCAM1004 (bceN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008446 GDP-mannose 4,6-dehydratase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: GenBank:AFR13036.1
 ECO:0000250
sequence similarity evidence used in manual assertion		 23460819 Reviewed by curator
Biological Process GO:0045226 extracellular polysaccharide biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: GenBank:AFR13036.1
 ECO:0000250
sequence similarity evidence used in manual assertion		 23460819 Reviewed by curator
Biological Process GO:0019673 GDP-mannose metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01472
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008446 GDP-mannose 4,6-dehydratase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01472
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc GDP-L-colitose biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bcj00051 Fructose and mannose metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00520 Amino sugar and nucleotide sugar metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bcj00520 Amino sugar and nucleotide sugar metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc GDP-mycosamine biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc GDP-6-deoxy-D-talose biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc GDP-L-fucose biosynthesis I (from GDP-D-mannose) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc GDP-D-perosamine biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bcj01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00051 Fructose and mannose metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase IPR006368 GDP-mannose 4,6-dehydratase 6 340 2.0E-143
Gene3D G3DSA:3.40.50.720 8 325 2.3E-146
CDD cd05260 GDP_MD_SDR_e 7 339 1.00265E-169
Pfam PF16363 GDP-mannose 4,6 dehydratase IPR016040 NAD(P)-binding domain 9 334 3.6E-135
Gene3D G3DSA:3.90.25.10 191 339 2.3E-146
Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. IPR006368 GDP-mannose 4,6-dehydratase 6 344 52.19
SUPERFAMILY SSF51735 IPR036291 NAD(P)-binding domain superfamily 6 338 8.96E-73

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.