Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0016491 | oxidoreductase activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF46977
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006099 | tricarboxylic acid cycle |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01816
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0050660 | flavin adenine dinucleotide binding |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01812
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0055114 | oxidation-reduction process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01812
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01812
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0022900 | electron transport chain |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01812
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | bcj00190 | Oxidative phosphorylation | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG (InterPro) | 00190 | Oxidative phosphorylation | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
|
KEGG (InterPro) | 00020 | Citrate cycle (TCA cycle) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
|
MetaCyc | TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
KEGG (InterPro) | 00720 | Carbon fixation pathways in prokaryotes | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
|
MetaCyc | aerobic respiration III (alternative oxidase pathway) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
KEGG | bcj00020 | Citrate cycle (TCA cycle) | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
MetaCyc | methylaspartate cycle | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
KEGG | bcj00650 | Butanoate metabolism | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG (InterPro) | 00650 | Butanoate metabolism | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
|
KEGG | bcj01110 | Biosynthesis of secondary metabolites | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
MetaCyc | TCA cycle VII (acetate-producers) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
KEGG | bcj01200 | Carbon metabolism | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
MetaCyc | TCA cycle II (plants and fungi) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | aerobic respiration I (cytochrome c) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
KEGG | bcj01100 | Metabolic pathways | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | bcj01120 | Microbial metabolism in diverse environments | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
MetaCyc | aerobic respiration II (cytochrome c) (yeast) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
KEGG | bcj01130 | Biosynthesis of antibiotics | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
MetaCyc | superpathway of glyoxylate cycle and fatty acid degradation | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
TIGRFAM | TIGR01816 | sdhA_forward: succinate dehydrogenase, flavoprotein subunit | IPR011281 | Succinate dehydrogenase, flavoprotein subunit | 11 | 591 | 2.3E-285 |
ProSitePatterns | PS00504 | Fumarate reductase / succinate dehydrogenase FAD-binding site. | IPR003952 | Fumarate reductase/succinate dehydrogenase, FAD-binding site | 48 | 57 | - |
TIGRFAM | TIGR01812 | sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit | IPR014006 | Succinate dehydrogenase/fumarate reductase, flavoprotein subunit | 14 | 589 | 4.9E-241 |
Gene3D | G3DSA:3.90.700.10 | IPR027477 | Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily | 251 | 354 | 7.6E-162 | |
SUPERFAMILY | SSF56425 | IPR027477 | Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily | 241 | 359 | 7.33E-44 | |
PIRSF | PIRSF000171 | 3 | 582 | 7.6E-45 | |||
Coils | Coil | 516 | 536 | - | |||
Gene3D | G3DSA:1.20.58.100 | 437 | 550 | 3.2E-35 | |||
Gene3D | G3DSA:3.50.50.60 | IPR036188 | FAD/NAD(P)-binding domain superfamily | 14 | 419 | 7.6E-162 | |
SUPERFAMILY | SSF51905 | IPR036188 | FAD/NAD(P)-binding domain superfamily | 8 | 435 | 8.51E-78 | |
Pfam | PF00890 | FAD binding domain | IPR003953 | FAD-dependent oxidoreductase 2, FAD binding domain | 14 | 408 | 9.9E-114 |
PRINTS | PR00411 | Pyridine nucleotide disulphide reductase class-I signature | 386 | 393 | 8.6E-6 | ||
Gene3D | G3DSA:4.10.80.40 | 551 | 591 | 5.6E-10 | |||
Pfam | PF02910 | Fumarate reductase flavoprotein C-term | IPR015939 | Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal | 465 | 590 | 1.7E-41 |
PRINTS | PR00411 | Pyridine nucleotide disulphide reductase class-I signature | 14 | 36 | 8.6E-6 | ||
SUPERFAMILY | SSF46977 | IPR037099 | Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily | 456 | 591 | 1.16E-46 |