Burkholderia cenocepacia J2315, BCAM0917 (dnaG)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016779 nucleotidyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF10410
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006260 DNA replication
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00400
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003896 DNA primase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002811
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006269 DNA replication, synthesis of RNA primer
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002811
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00400
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008270 zinc ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002811
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03030 DNA replication 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.1360.10 252 378 9.8E-41
ProSiteProfiles PS50880 Toprim domain profile. IPR006171 TOPRIM domain 270 352 20.238
Hamap MF_00974 DNA primase [dnaG]. IPR030846 DNA primase DnaG, bacteria 1 577 28.167
PIRSF PIRSF002811 IPR030846 DNA primase DnaG, bacteria 1 606 6.3E-143
Pfam PF01807 CHC2 zinc finger IPR002694 Zinc finger, CHC2-type 3 97 1.2E-38
SUPERFAMILY SSF56731 125 434 3.4E-103
SUPERFAMILY SSF57783 1 97 9.01E-37
SMART SM00766 IPR013173 DNA primase DnaG, DnaB-binding domain 466 613 1.8E-21
SMART SM00493 IPR006171 TOPRIM domain 270 341 9.5E-14
CDD cd03364 TOPRIM_DnaG_primases IPR034151 Bacterial DnaG primase, TOPRIM domain 270 351 4.89654E-23
Gene3D G3DSA:3.90.580.10 IPR036977 DNA Primase, CHC2-type zinc finger 1 97 2.4E-39
SMART SM00400 IPR002694 Zinc finger, CHC2-type 33 87 1.4E-33
Pfam PF10410 DnaB-helicase binding domain of primase IPR019475 DNA primase, DnaB-helicase binding domain 380 434 1.3E-9
Pfam PF08275 DNA primase catalytic core, N-terminal domain IPR013264 DNA primase, catalytic core, N-terminal 135 262 3.9E-37
TIGRFAM TIGR01391 dnaG: DNA primase IPR006295 DNA primase, DnaG 1 429 5.9E-135
Gene3D G3DSA:3.90.980.10 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily 119 251 4.4E-40
Pfam PF13662 Toprim domain IPR006171 TOPRIM domain 272 338 1.8E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.