Burkholderia cenocepacia J2315, BCAM0580 (rpfR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0071111 cyclic-guanylate-specific phosphodiesterase activity
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.70.270 234 409 2.1E-55
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 236 392 9.4E-44
Pfam PF00563 EAL domain IPR001633 EAL domain 414 647 3.6E-74
ProSiteProfiles PS50887 GGDEF domain profile. IPR000160 GGDEF domain 267 399 32.507
CDD cd01948 EAL IPR001633 EAL domain 413 652 6.51682E-108
SMART SM00091 IPR000014 PAS domain 110 176 0.0099
ProSiteProfiles PS50883 EAL domain profile. IPR001633 EAL domain 408 661 80.119
TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein IPR000014 PAS domain 114 232 1.0E-7
SUPERFAMILY SSF141868 IPR035919 EAL domain superfamily 414 660 1.83E-91
Gene3D G3DSA:3.30.450.20 105 233 5.4E-12
SUPERFAMILY SSF55073 IPR029787 Nucleotide cyclase 241 398 2.62E-44
TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 233 396 2.7E-35
Gene3D G3DSA:3.20.20.450 IPR035919 EAL domain superfamily 410 665 2.4E-100
CDD cd00130 PAS IPR000014 PAS domain 120 222 0.00974839
ProSiteProfiles PS50112 PAS repeat profile. IPR000014 PAS domain 108 163 10.908
CDD cd01949 GGDEF IPR000160 GGDEF domain 237 395 1.71975E-56
SUPERFAMILY SSF55785 IPR035965 PAS domain superfamily 123 234 1.77E-12
SMART SM00267 IPR000160 GGDEF domain 225 397 1.7E-54
SMART SM00052 IPR001633 EAL domain 407 652 3.5E-117

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.