Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
CDD | cd08432 | PBP2_GcdR_TrpI_HvrB_AmpR_like | 96 | 287 | 7.63096E-64 | ||
ProSiteProfiles | PS50931 | LysR-type HTH domain profile. | IPR000847 | Transcription regulator HTH, LysR | 9 | 66 | 23.723 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 11 | 69 | 2.3E-16 |
SUPERFAMILY | SSF46785 | IPR036390 | Winged helix DNA-binding domain superfamily | 8 | 88 | 1.78E-19 | |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 26 | 37 | 5.9E-8 |
SUPERFAMILY | SSF53850 | 96 | 293 | 1.16E-35 | |||
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 94 | 290 | 8.1E-32 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 47 | 58 | 5.9E-8 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 37 | 47 | 5.9E-8 |
Gene3D | G3DSA:1.10.10.10 | IPR036388 | Winged helix-like DNA-binding domain superfamily | 10 | 94 | 1.2E-19 | |
Gene3D | G3DSA:3.40.190.10 | 165 | 260 | 2.3E-53 | |||
Gene3D | G3DSA:3.40.190.10 | 104 | 287 | 2.3E-53 |