Burkholderia cenocepacia J2315, BCAM0146 (polA)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0000166	nucleotide binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00486	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00136	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003887	DNA-directed DNA polymerase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00486	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003676	nucleic acid binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00486	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00486		IPR006172	DNA-directed DNA polymerase, family B	151	562	3.3E-68
SUPERFAMILY	SSF53098		IPR012337	Ribonuclease H-like superfamily	5	396	7.12E-87
Gene3D	G3DSA:3.30.70.2250				42	108	9.4E-48
PRINTS	PR00106	DNA-directed DNA-polymerase family B signature	IPR006172	DNA-directed DNA polymerase, family B	548	556	3.2E-10
Gene3D	G3DSA:1.10.132.60		IPR042087	DNA polymerase family B, C-terminal domain	648	792	1.6E-59
Gene3D	G3DSA:3.90.1600.10		IPR023211	DNA polymerase, palm domain superfamily	457	641	5.4E-53
Pfam	PF00136	DNA polymerase family B	IPR006134	DNA-directed DNA polymerase, family B, multifunctional domain	384	437	7.2E-8
Gene3D	G3DSA:3.90.1600.10		IPR023211	DNA polymerase, palm domain superfamily	355	453	8.2E-30
CDD	cd05784	DNA_polB_II_exo			151	351	1.53316E-105
SUPERFAMILY	SSF56672				392	790	9.45E-113
Gene3D	G3DSA:3.30.420.10		IPR036397	Ribonuclease H superfamily	154	354	6.4E-72
Pfam	PF00136	DNA polymerase family B	IPR006134	DNA-directed DNA polymerase, family B, multifunctional domain	497	747	1.7E-28
ProSitePatterns	PS00116	DNA polymerase family B signature.	IPR017964	DNA-directed DNA polymerase, family B, conserved site	550	558	-
Gene3D	G3DSA:2.40.50.590				7	151	9.4E-48
PRINTS	PR00106	DNA-directed DNA-polymerase family B signature	IPR006172	DNA-directed DNA polymerase, family B	496	508	3.2E-10
PRINTS	PR00106	DNA-directed DNA-polymerase family B signature	IPR006172	DNA-directed DNA polymerase, family B	422	435	3.2E-10
Pfam	PF03104	DNA polymerase family B, exonuclease domain	IPR006133	DNA-directed DNA polymerase, family B, exonuclease domain	80	303	1.0E-6
CDD	cd05537	POLBc_Pol_II			404	777	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.