Burkholderia cenocepacia J2315, BCAM0049 (fixK)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13545
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00042
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13545
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00092 HTH_CRP 172 241 2.72798E-16
Gene3D G3DSA:2.60.120.10 IPR014710 RmlC-like jelly roll fold 49 169 7.2E-42
ProSiteProfiles PS51063 Crp-type HTH domain profile. IPR012318 Crp-type HTH domain 170 243 26.931
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 171 248 2.6E-27
Pfam PF00027 Cyclic nucleotide-binding domain IPR000595 Cyclic nucleotide-binding domain 56 141 4.7E-18
PRINTS PR00034 CRP bacterial regulatory protein HTH signature IPR012318 Crp-type HTH domain 199 215 3.8E-12
PRINTS PR00034 CRP bacterial regulatory protein HTH signature IPR012318 Crp-type HTH domain 215 230 3.8E-12
Pfam PF13545 Crp-like helix-turn-helix domain IPR012318 Crp-type HTH domain 174 247 6.3E-21
CDD cd00038 CAP_ED IPR000595 Cyclic nucleotide-binding domain 36 150 6.70492E-24
SMART SM00419 IPR012318 Crp-type HTH domain 193 241 1.6E-18
SUPERFAMILY SSF51206 IPR018490 Cyclic nucleotide-binding-like 29 167 1.57E-29
SMART SM00100 IPR000595 Cyclic nucleotide-binding domain 36 157 3.2E-17
ProSiteProfiles PS50042 cAMP/cGMP binding motif profile. IPR000595 Cyclic nucleotide-binding domain 36 119 11.573
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 171 247 1.26E-21
ProSitePatterns PS00042 Crp-type HTH domain signature. IPR018335 Transcription regulator HTH, Crp-type, conserved site 201 224 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.