Burkholderia cenocepacia J2315, BCAM0043
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.30.110.50 | 43 | 366 | 6.3E-74 | |||
| Pfam | PF10106 | Uncharacterized protein conserved in bacteria (DUF2345) | IPR018769 | Domain of unknown function DUF2345, Vgr C-terminal | 655 | 802 | 1.1E-47 |
| SUPERFAMILY | SSF69279 | 42 | 213 | 1.46E-38 | |||
| TIGRFAM | TIGR03361 | VI_Rhs_Vgr: type VI secretion system Vgr family protein | IPR017847 | Type VI secretion system, RhsGE-associated Vgr family subset | 42 | 545 | 1.2E-96 |
| SUPERFAMILY | SSF69279 | 230 | 392 | 1.87E-23 | |||
| SUPERFAMILY | SSF69349 | 474 | 550 | 1.1E-8 | |||
| Gene3D | G3DSA:2.40.50.230 | IPR037026 | Vgr protein, OB-fold domain superfamily | 394 | 489 | 2.7E-24 | |
| Gene3D | G3DSA:3.30.1920.30 | 253 | 318 | 6.3E-74 | |||
| Gene3D | G3DSA:3.55.50.10 | 121 | 218 | 6.3E-74 | |||
| SUPERFAMILY | SSF69255 | 402 | 482 | 6.54E-19 | |||
| Pfam | PF13296 | Putative type VI secretion system Rhs element Vgr | IPR028244 | Putative type VI secretion system, Rhs element associated Vgr domain | 516 | 622 | 2.0E-31 |
| Pfam | PF05954 | Phage late control gene D protein (GPD) | 52 | 366 | 1.8E-66 | ||
| TIGRFAM | TIGR01646 | vgr_GE: Rhs element Vgr protein | IPR006533 | Type VI secretion system, RhsGE-associated Vgr protein | 46 | 541 | 3.6E-123 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.