Burkholderia cenocepacia J2315, BCAL3455 (lpxC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009245 lipid A biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:P0A725
 ECO:0000303
non-traceable author statement used in manual assertion		 15610978 Reviewed by curator
Molecular Function GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.1700.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009245 lipid A biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.1700.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj00540 Lipopolysaccharide biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00540 Lipopolysaccharide biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.230.20 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal 1 127 1.1E-47
SUPERFAMILY SSF54211 IPR020568 Ribosomal protein S5 domain 2-type fold 3 125 3.41E-41
Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase 4 275 4.5E-107
TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase 2 296 3.7E-125
Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase 2 279 45.99
SUPERFAMILY SSF54211 IPR020568 Ribosomal protein S5 domain 2-type fold 133 276 1.82E-51
Gene3D G3DSA:3.30.1700.10 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal 128 304 8.3E-66

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.