Burkholderia cenocepacia J2315, BCAL3339 (ruvB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006310 DNA recombination
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00635
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009378 four-way junction helicase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00635
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00635
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00635
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00635
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03440 Homologous recombination 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00382 IPR003593 AAA+ ATPase domain 61 188 1.5E-12
Gene3D G3DSA:1.10.8.60 192 266 6.1E-31
TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB IPR004605 DNA helicase, Holliday junction RuvB-type 34 336 4.2E-146
CDD cd00009 AAA 39 189 2.27359E-15
Pfam PF17864 RuvB AAA lid domain IPR041445 RuvB, AAA lid domain 191 264 7.1E-33
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 266 340 3.54E-25
Pfam PF05491 RuvB C-terminal winged helix domain IPR008823 RuvB C-terminal winged helix domain 267 335 4.5E-24
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 267 345 5.8E-32
Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. IPR004605 DNA helicase, Holliday junction RuvB-type 1 356 182.312
Gene3D G3DSA:3.40.50.300 28 191 1.6E-42
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 30 260 4.49E-55
Pfam PF05496 Holliday junction DNA helicase RuvB P-loop domain IPR008824 RuvB-like P-loop domain 30 188 2.7E-83

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.