Burkholderia cenocepacia J2315, BCAL2412 (rhlE2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00270
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00270
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site 166 174 -
SMART SM00490 IPR001650 Helicase, C-terminal 271 352 5.9E-31
CDD cd18787 SF2_C_DEAD 232 361 6.79096E-57
CDD cd00268 DEADc 22 221 5.58308E-108
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 87 373 3.79E-74
Pfam PF00270 DEAD/DEAH box helicase IPR011545 DEAD/DEAH box helicase domain 35 209 7.9E-52
MobiDBLite mobidb-lite consensus disorder prediction 381 447 -
Gene3D G3DSA:3.40.50.300 220 389 2.3E-50
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. IPR014001 Helicase superfamily 1/2, ATP-binding domain 42 220 31.798
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile. IPR001650 Helicase, C-terminal 231 391 21.827
Pfam PF00271 Helicase conserved C-terminal domain IPR001650 Helicase, C-terminal 244 352 3.1E-26
MobiDBLite mobidb-lite consensus disorder prediction 381 494 -
ProSiteProfiles PS51195 DEAD-box RNA helicase Q motif profile. IPR014014 RNA helicase, DEAD-box type, Q motif 11 39 12.592
Gene3D G3DSA:3.40.50.300 1 219 4.2E-83
SMART SM00487 IPR014001 Helicase superfamily 1/2, ATP-binding domain 30 235 5.2E-64

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.