Burkholderia cenocepacia J2315, BCAL2289

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53681
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0036361 racemase activity, acting on amino acids and derivatives
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01177
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006807 nitrogen compound metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01177
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008881 glutamate racemase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00067
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009252 peptidoglycan biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00067
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00471 D-Glutamine and D-glutamate metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bcj00471 D-Glutamine and D-glutamate metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.1860 105 216 8.9E-79
TIGRFAM TIGR00067 glut_race: glutamate racemase IPR004391 Glutamate racemase 16 258 1.2E-59
SUPERFAMILY SSF53681 IPR001920 Asp/Glu racemase 119 271 2.94E-35
Hamap MF_00258 Glutamate racemase [murI]. IPR004391 Glutamate racemase 14 266 35.06
SUPERFAMILY SSF53681 IPR001920 Asp/Glu racemase 15 115 1.7E-32
ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. IPR018187 Asp/Glu racemase, active site 1 80 88 -
Gene3D G3DSA:3.40.50.1860 16 262 8.9E-79
Pfam PF01177 Asp/Glu/Hydantoin racemase IPR015942 Asp/Glu/hydantoin racemase 16 224 1.6E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.