Burkholderia cenocepacia J2315, BCAL2109 (radA)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003684	damaged DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:cd01121	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0008094	DNA-dependent ATPase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50162	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50162	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:cd01121	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006281	DNA repair	ISM Inferred from Sequence Model Term mapped from: InterPro:cd01121	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR01874	DNA repair protein radA signature			213	241	1.5E-95
SMART	SM00382		IPR003593	AAA+ ATPase domain	86	244	3.7E-7
Coils	Coil				444	458	-
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	65	287	1.78E-49
SUPERFAMILY	SSF54211		IPR020568	Ribosomal protein S5 domain 2-type fold	255	456	5.31E-39
PRINTS	PR01874	DNA repair protein radA signature			10	34	1.5E-95
Hamap	MF_01498	DNA repair protein RadA [radA].	IPR004504	DNA repair protein RadA	21	455	43.95
PRINTS	PR01874	DNA repair protein radA signature			78	106	1.5E-95
Gene3D	G3DSA:3.40.50.300				56	275	7.2E-42
Pfam	PF18073	Rubredoxin metal binding domain	IPR041166	LapB, rubredoxin metal binding domain	8	35	3.2E-13
CDD	cd01121	Sms	IPR004504	DNA repair protein RadA	8	381	0.0
Gene3D	G3DSA:3.30.230.10		IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	327	458	2.0E-15
PRINTS	PR01874	DNA repair protein radA signature			322	345	1.5E-95
Pfam	PF13481	AAA domain			80	222	7.9E-16
PRINTS	PR01874	DNA repair protein radA signature			174	198	1.5E-95
PRINTS	PR01874	DNA repair protein radA signature			119	136	1.5E-95
ProSiteProfiles	PS50162	RecA family profile 1.	IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	65	218	38.258
TIGRFAM	TIGR00416	sms: DNA repair protein RadA	IPR004504	DNA repair protein RadA	1	451	7.7E-194
PRINTS	PR01874	DNA repair protein radA signature			248	274	1.5E-95

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.