Burkholderia cenocepacia J2315, BCAL2101 (dapD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009089 lysine biosynthetic process via diaminopimelate
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00811
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008666 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00811
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016740 transferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00101
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj01230 Biosynthesis of amino acids 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01120 Microbial metabolism in diverse environments 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj00300 Lysine biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF51161 IPR011004 Trimeric LpxA-like superfamily 4 258 2.08E-74
Gene3D G3DSA:2.160.10.10 89 259 1.4E-55
Pfam PF14602 Hexapeptide repeat of succinyl-transferase IPR001451 Hexapeptide repeat 177 211 1.0E-13
ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. IPR018357 Hexapeptide transferase, conserved site 136 164 -
Pfam PF00132 Bacterial transferase hexapeptide (six repeats) IPR001451 Hexapeptide repeat 135 168 0.0022
TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family 4 274 1.0E-146
CDD cd03350 LbH_THP_succinylT 104 241 1.57857E-71
Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family 2 274 56.665
Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 4 70 9.5E-27
Gene3D G3DSA:1.10.166.10 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily 2 71 4.8E-33

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.