Burkholderia cenocepacia J2315, BCAL2098

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005694 chromosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF06470
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0030261 chromosome condensation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007062 sister chromatid cohesion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF06470
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0051276 chromosome organization
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF06470
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF06470
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil 286 362 -
SUPERFAMILY SSF75553 IPR036277 SMCs flexible hinge superfamily 477 672 1.7E-10
MobiDBLite mobidb-lite consensus disorder prediction 333 362 -
Pfam PF02463 RecF/RecN/SMC N terminal domain IPR003395 RecF/RecN/SMC, N-terminal 3 1154 4.3E-62
Coils Coil 437 506 -
PIRSF PIRSF005719 IPR024704 Structural maintenance of chromosomes protein 1 1170 1.0E-252
CDD cd03278 ABC_SMC_barmotin 1020 1155 2.55668E-59
Coils Coil 237 278 -
MobiDBLite mobidb-lite consensus disorder prediction 416 434 -
Coils Coil 170 211 -
Hamap MF_01894 Chromosome partition protein Smc [smc]. IPR011890 Structural maintenance of chromosomes protein, prokaryotic 1 1163 22.351
MobiDBLite mobidb-lite consensus disorder prediction 332 363 -
SMART SM00968 IPR010935 SMCs flexible hinge 518 625 4.0E-15
Coils Coil 405 425 -
Gene3D G3DSA:3.40.50.300 1009 1170 3.7E-46
Coils Coil 1169 1170 -
Pfam PF06470 SMC proteins Flexible Hinge Domain IPR010935 SMCs flexible hinge 520 623 7.2E-9
MobiDBLite mobidb-lite consensus disorder prediction 402 434 -
Gene3D G3DSA:3.40.50.300 1 236 7.9E-50
CDD cd03278 ABC_SMC_barmotin 3 156 3.41001E-51
TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC IPR011890 Structural maintenance of chromosomes protein, prokaryotic 2 1161 0.0
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 1 1159 3.4E-57
Coils Coil 743 777 -
Coils Coil 813 854 -
Coils Coil 867 894 -
Coils Coil 785 805 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.