Burkholderia cenocepacia J2315, BCAL2094

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0001522 pseudouridine synthesis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00849
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009982 pseudouridine synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00849
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009451 RNA modification
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00849
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00849
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01479 S4 domain IPR002942 RNA-binding S4 domain 377 421 9.3E-10
MobiDBLite mobidb-lite consensus disorder prediction 72 90 -
SUPERFAMILY SSF55120 IPR020103 Pseudouridine synthase, catalytic domain superfamily 437 623 1.02E-30
Gene3D G3DSA:3.30.2350.10 434 625 7.1E-41
Gene3D G3DSA:3.10.290.10 IPR036986 RNA-binding S4 domain superfamily 374 429 1.2E-17
Pfam PF00849 RNA pseudouridylate synthase IPR006145 Pseudouridine synthase, RsuA/RluA 439 589 6.4E-10
SUPERFAMILY SSF55174 351 460 8.9E-17
SMART SM00363 IPR002942 RNA-binding S4 domain 377 434 1.5E-8
MobiDBLite mobidb-lite consensus disorder prediction 1 364 -
MobiDBLite mobidb-lite consensus disorder prediction 102 352 -
CDD cd00165 S4 IPR002942 RNA-binding S4 domain 377 428 6.4423E-12
ProSiteProfiles PS50889 S4 RNA-binding domain profile. IPR002942 RNA-binding S4 domain 377 444 13.816

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.