Burkholderia cenocepacia J2315, BCAL2078 (lpxB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009245 lipid A biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:P10441
ECO:0000303
non-traceable author statement used in manual assertion
15610978 Reviewed by curator
Molecular Function GO:0008915 lipid-A-disaccharide synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00392
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009245 lipid A biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00392
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00540 Lipopolysaccharide biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bcj00540 Lipopolysaccharide biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53756 9 383 7.85E-30
CDD cd03801 GT4_PimA-like 174 383 2.46888E-6
Pfam PF02684 Lipid-A-disaccharide synthetase IPR003835 Glycosyl transferase, family 19 11 377 3.6E-96
Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. IPR003835 Glycosyl transferase, family 19 7 383 37.255
TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase IPR003835 Glycosyl transferase, family 19 8 379 1.2E-95

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.