Burkholderia cenocepacia J2315, BCAL2011 (ompR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj02020 Two-component system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00448 IPR001789 Signal transduction response regulator, receiver domain 7 118 3.8E-44
SUPERFAMILY SSF46894 IPR016032 Signal transduction response regulator, C-terminal effector 136 237 4.25E-29
Gene3D G3DSA:3.40.50.2300 1 127 8.1E-39
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 133 241 5.5E-38
ProSiteProfiles PS50110 Response regulatory domain profile. IPR001789 Signal transduction response regulator, receiver domain 8 122 47.265
SUPERFAMILY SSF52172 IPR011006 CheY-like superfamily 4 127 5.12E-42
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 159 235 1.5E-23
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 146 235 3.21944E-34
CDD cd00156 REC IPR001789 Signal transduction response regulator, receiver domain 27 122 1.91971E-34
ProSiteProfiles PS51755 OmpR/PhoB-type DNA-binding domain profile. IPR001867 OmpR/PhoB-type DNA-binding domain 138 237 41.592
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 9 118 5.5E-31
SMART SM00862 IPR001867 OmpR/PhoB-type DNA-binding domain 159 235 3.9E-26

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.