Burkholderia cenocepacia J2315, BCAL1889 (rumA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008173 RNA methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS51687
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01010
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006396 RNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS51687
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.1350.30 147 288 2.2E-104
Gene3D G3DSA:2.40.50.140 9 99 1.7E-17
SUPERFAMILY SSF53335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase 88 464 5.1E-76
ProSiteProfiles PS51687 SAM-dependent methyltransferase RNA m(5)U-type domain profile. IPR010280 (Uracil-5)-methyltransferase family 100 465 76.144
CDD cd02440 AdoMet_MTases 313 405 9.58029E-5
MobiDBLite mobidb-lite consensus disorder prediction 1 21 -
Gene3D G3DSA:3.40.50.150 100 459 2.2E-104
Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 24 465 68.844
Pfam PF05958 tRNA (Uracil-5-)-methyltransferase IPR010280 (Uracil-5)-methyltransferase family 286 464 1.2E-17
SUPERFAMILY SSF50249 IPR012340 Nucleic acid-binding, OB-fold 11 79 1.54E-9
ProSiteProfiles PS50926 TRAM domain profile. IPR002792 TRAM domain 16 80 11.619

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.