Burkholderia cenocepacia J2315, BCAL1885
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF47413
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF47413 | IPR010982 | Lambda repressor-like, DNA-binding domain superfamily | 26 | 92 | 1.39E-6 | |
| Pfam | PF13413 | Helix-turn-helix domain | 31 | 91 | 3.1E-20 | ||
| CDD | cd00093 | HTH_XRE | IPR001387 | Cro/C1-type helix-turn-helix domain | 29 | 90 | 5.86547E-7 |
| Gene3D | G3DSA:1.10.260.40 | 21 | 112 | 3.0E-22 | |||
| SMART | SM00530 | IPR001387 | Cro/C1-type helix-turn-helix domain | 31 | 92 | 1.4E-5 | |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | ||
| Pfam | PF13464 | Domain of unknown function (DUF4115) | IPR025194 | Domain of unknown function DUF4115 | 261 | 337 | 2.6E-24 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.