Burkholderia cenocepacia J2315, BCAL1660

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:cd01392	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:cd01392	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
CDD	cd01392	HTH_LacI	IPR000843	LacI-type HTH domain	5	56	8.81116E-17
Gene3D	G3DSA:3.40.50.2300				160	288	1.0E-84
SUPERFAMILY	SSF53822		IPR028082	Periplasmic binding protein-like I	61	331	1.57E-86
Pfam	PF00356	Bacterial regulatory proteins, lacI family	IPR000843	LacI-type HTH domain	3	48	1.8E-17
ProSiteProfiles	PS50932	LacI-type HTH domain profile.	IPR000843	LacI-type HTH domain	2	56	32.503
PRINTS	PR00036	LacI bacterial regulatory protein HTH signature	IPR000843	LacI-type HTH domain	3	13	2.8E-5
Pfam	PF13377	Periplasmic binding protein-like domain			168	330	4.9E-40
PRINTS	PR00036	LacI bacterial regulatory protein HTH signature	IPR000843	LacI-type HTH domain	13	23	2.8E-5
SMART	SM00354		IPR000843	LacI-type HTH domain	1	71	2.2E-31
SUPERFAMILY	SSF47413		IPR010982	Lambda repressor-like, DNA-binding domain superfamily	1	56	6.17E-17
Gene3D	G3DSA:1.10.260.40				3	55	2.9E-22
ProSitePatterns	PS00356	LacI-type HTH domain signature.			4	22	-
Gene3D	G3DSA:3.40.50.2300				56	305	1.0E-84

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.