Burkholderia cenocepacia J2315, BCAL1513

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12802
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12802
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00598 Bacterial regulatory protein MarR family signature IPR000835 MarR-type HTH domain 113 133 4.4E-18
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 3 137 1.69E-33
Pfam PF12802 MarR family IPR000835 MarR-type HTH domain 28 86 1.4E-12
PRINTS PR00598 Bacterial regulatory protein MarR family signature IPR000835 MarR-type HTH domain 83 99 4.4E-18
SMART SM00347 IPR000835 MarR-type HTH domain 23 123 3.8E-25
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 1 140 1.1E-34
ProSiteProfiles PS50995 MarR-type HTH domain profile. IPR000835 MarR-type HTH domain 2 135 32.246
PRINTS PR00598 Bacterial regulatory protein MarR family signature IPR000835 MarR-type HTH domain 64 79 4.4E-18
PRINTS PR00598 Bacterial regulatory protein MarR family signature IPR000835 MarR-type HTH domain 47 63 4.4E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.