Burkholderia cenocepacia J2315, BCAL1150

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00041
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00041
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00041
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 251 300 8.06E-7
PRINTS PR00032 AraC bacterial regulatory protein HTH signature IPR020449 Transcription regulator HTH, AraC- type 322 337 3.0E-5
Pfam PF12833 Helix-turn-helix domain IPR018060 DNA binding HTH domain, AraC-type 273 355 8.5E-25
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 304 357 7.73E-9
Pfam PF14525 AraC-binding-like domain IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like 53 230 2.3E-29
MobiDBLite mobidb-lite consensus disorder prediction 347 363 -
MobiDBLite mobidb-lite consensus disorder prediction 1 28 -
MobiDBLite mobidb-lite consensus disorder prediction 344 363 -
SMART SM00342 IPR018060 DNA binding HTH domain, AraC-type 267 353 6.0E-25
ProSiteProfiles PS01124 Bacterial regulatory proteins, araC family DNA-binding domain profile. IPR018060 DNA binding HTH domain, AraC-type 254 355 27.218
ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. IPR018062 HTH domain AraC-type, conserved site 304 349 -
Gene3D G3DSA:1.10.10.60 251 358 7.3E-32
PRINTS PR00032 AraC bacterial regulatory protein HTH signature IPR020449 Transcription regulator HTH, AraC- type 337 353 3.0E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.