Burkholderia cenocepacia J2315, BCAL1080 (mdtB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00873
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00873
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00873
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj02020 Two-component system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1640.10 10 503 1.1E-289
SUPERFAMILY SSF82693 136 324 1.1E-20
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 38 56 1.3E-76
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 463 486 1.3E-76
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 10 34 1.3E-76
SUPERFAMILY SSF82866 290 491 2.62E-45
SUPERFAMILY SSF82693 666 842 2.09E-13
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 543 560 1.3E-76
Gene3D G3DSA:3.30.70.1440 654 852 1.1E-289
Gene3D G3DSA:3.30.2090.10 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 179 269 1.1E-289
Gene3D G3DSA:1.20.1640.10 504 1010 1.1E-289
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 330 353 1.3E-76
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 610 624 1.3E-76
Gene3D G3DSA:3.30.2090.10 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 706 794 1.1E-289
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 357 378 1.3E-76
Gene3D G3DSA:3.30.70.1320 133 326 1.1E-289
Pfam PF00873 AcrB/AcrD/AcrF family IPR001036 Acriflavin resistance protein 4 1013 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 438 461 1.3E-76
SUPERFAMILY SSF82693 556 653 4.71E-17
SUPERFAMILY SSF82714 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 183 265 1.57E-17
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 385 409 1.3E-76
SUPERFAMILY SSF82866 816 1011 2.49E-44
Gene3D G3DSA:3.30.70.1430 558 653 1.1E-289
SUPERFAMILY SSF82714 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 709 790 5.1E-17
SUPERFAMILY SSF82693 40 130 9.42E-23
Gene3D G3DSA:3.30.70.1430 40 802 1.1E-289

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.