Burkholderia cenocepacia J2315, BCAL1047 (pdxY)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0009443 | pyridoxal 5'-phosphate salvage |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01639
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0008478 | pyridoxal kinase activity |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01639
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| MetaCyc | pyridoxal 5'-phosphate salvage II (plants) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| KEGG (InterPro) | 00750 | Vitamin B6 metabolism | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
|
| KEGG | bcj00750 | Vitamin B6 metabolism | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bcj01100 | Metabolic pathways | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| TIGRFAM | TIGR00687 | pyridox_kin: pyridoxal kinase | IPR004625 | Pyridoxine kinase | 1 | 280 | 1.5E-99 |
| Pfam | PF08543 | Phosphomethylpyrimidine kinase | IPR013749 | Pyridoxamine kinase/Phosphomethylpyrimidine kinase | 73 | 258 | 2.3E-11 |
| SUPERFAMILY | SSF53613 | IPR029056 | Ribokinase-like | 1 | 275 | 6.86E-68 | |
| Hamap | MF_01639 | Pyridoxal kinase PdxY [pdxY]. | IPR023685 | Pyridoxal kinase PdxY | 1 | 284 | 51.27 |
| CDD | cd01173 | pyridoxal_pyridoxamine_kinase | IPR004625 | Pyridoxine kinase | 3 | 257 | 8.91788E-113 |
| Gene3D | G3DSA:3.40.1190.20 | IPR029056 | Ribokinase-like | 1 | 286 | 1.5E-87 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.