Burkholderia cenocepacia J2315, BCAL1007 (recO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00201
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006310 DNA recombination
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00201
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03440 Homologous recombination 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.40.50.140 45 119 1.1E-33
Hamap MF_00201 DNA repair protein RecO [recO]. IPR003717 Recombination protein O, RecO 44 275 21.424
Gene3D G3DSA:1.20.1440.120 122 278 5.4E-42
TIGRFAM TIGR00613 reco: DNA repair protein RecO IPR003717 Recombination protein O, RecO 49 192 3.0E-24
Pfam PF11967 Recombination protein O N terminal IPR022572 DNA replication/recombination mediator RecO, N-terminal 47 120 1.3E-23
MobiDBLite mobidb-lite consensus disorder prediction 1 42 -
SUPERFAMILY SSF50249 IPR012340 Nucleic acid-binding, OB-fold 46 119 7.37E-16
SUPERFAMILY SSF57863 IPR037278 ARFGAP/RecO-like zinc finger 129 253 2.04E-8
Pfam PF02565 Recombination protein O C terminal IPR003717 Recombination protein O, RecO 127 269 2.9E-19

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.