Burkholderia cenocepacia J2315, BCAL1006 (era)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF54814
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005525 GTP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd04163
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS51713 Era-type guanine nucleotide-binding (G) domain profile. IPR030388 Era-type guanine nucleotide-binding (G) domain 10 177 59.559
TIGRFAM TIGR00436 era: GTP-binding protein Era IPR005662 GTP-binding protein Era 12 281 5.1E-82
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 14 208 5.58E-42
TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain IPR005225 Small GTP-binding protein domain 12 171 3.1E-27
CDD cd04163 Era IPR030388 Era-type guanine nucleotide-binding (G) domain 9 175 4.25167E-84
Hamap MF_00367 GTPase Era [era]. IPR005662 GTP-binding protein Era 9 298 34.603
PRINTS PR00326 GTP1/OBG GTP-binding protein family signature IPR006073 GTP binding domain 14 34 1.2E-7
Gene3D G3DSA:3.30.300.20 IPR015946 K homology domain-like, alpha/beta 188 299 1.0E-37
Pfam PF07650 KH domain IPR004044 K Homology domain, type 2 211 286 1.0E-17
Pfam PF01926 50S ribosome-binding GTPase IPR006073 GTP binding domain 14 127 4.5E-24
Gene3D G3DSA:3.40.50.300 9 186 7.7E-44
ProSiteProfiles PS50823 Type-2 KH domain profile. IPR004044 K Homology domain, type 2 200 284 9.552
PRINTS PR00326 GTP1/OBG GTP-binding protein family signature IPR006073 GTP binding domain 82 100 1.2E-7
SUPERFAMILY SSF54814 IPR009019 K homology domain superfamily, prokaryotic type 184 299 2.06E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.