Burkholderia cenocepacia J2315, BCAL0865

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0097367 carbohydrate derivative binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01380
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01418
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:1901135 carbohydrate derivative metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01380
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01418
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS51071 RpiR-type HTH domain profile. IPR000281 Helix-turn-helix protein RpiR 1 64 15.333
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 1 65 8.2E-15
CDD cd05013 SIS_RpiR IPR035472 RpiR-like, SIS domain 116 241 3.89092E-34
Pfam PF01380 SIS domain IPR001347 Sugar isomerase (SIS) 112 240 5.7E-17
ProSiteProfiles PS51464 SIS domain profile. IPR001347 Sugar isomerase (SIS) 108 248 18.398
SUPERFAMILY SSF53697 93 265 5.42E-35
Gene3D G3DSA:3.40.50.10490 83 261 2.5E-34
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 2 60 1.27E-11
Pfam PF01418 Helix-turn-helix domain, rpiR family IPR000281 Helix-turn-helix protein RpiR 1 62 3.5E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.