Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003697 | single-stranded DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00621
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006260 | DNA replication |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00621
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | bcj03030 | DNA replication | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | bcj03430 | Mismatch repair | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | bcj03440 | Homologous recombination | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
ProSiteProfiles | PS50935 | Single-strand binding (SSB) domain profile. | IPR000424 | Primosome PriB/single-strand DNA-binding | 4 | 109 | 37.119 |
Pfam | PF00436 | Single-strand binding protein family | IPR000424 | Primosome PriB/single-strand DNA-binding | 4 | 108 | 3.6E-42 |
TIGRFAM | TIGR00621 | ssb: single-stranded DNA-binding protein | IPR011344 | Single-stranded DNA-binding protein | 2 | 185 | 6.1E-53 |
MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 185 | - | ||
Gene3D | G3DSA:2.40.50.140 | 1 | 117 | 4.6E-48 | |||
SUPERFAMILY | SSF50249 | IPR012340 | Nucleic acid-binding, OB-fold | 3 | 185 | 1.65E-60 | |
CDD | cd04496 | SSB_OBF | IPR000424 | Primosome PriB/single-strand DNA-binding | 7 | 108 | 1.77459E-45 |
Hamap | MF_00984 | Single-stranded DNA-binding protein. | IPR011344 | Single-stranded DNA-binding protein | 4 | 112 | 38.446 |