Burkholderia cenocepacia J2315, BCAL0749

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0022900	electron transport chain	ISM Inferred from Sequence Model Term mapped from: InterPro:PF02790	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016491	oxidoreductase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02866	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0020037	heme binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46626	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0004129	cytochrome-c oxidase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00116	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016021	integral component of membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PF02790	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005507	copper ion binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00116	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0009055	electron transfer activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46626	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0009279	cell outer membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01021	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00116	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bcj01100	Metabolic pathways	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	bcj00190	Oxidative phosphorylation	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR01166	Cytochrome c oxidase subunit II signature			177	198	2.0E-36
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	428	450	8.0E-6
PRINTS	PR01166	Cytochrome c oxidase subunit II signature			93	105	2.0E-36
Gene3D	G3DSA:3.30.1330.60		IPR036737	OmpA-like domain superfamily	412	521	1.1E-19
SUPERFAMILY	SSF81464		IPR036257	Cytochrome C oxidase subunit II, transmembrane domain superfamily	32	125	4.25E-28
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	458	473	8.0E-6
Pfam	PF00691	OmpA family	IPR006665	OmpA-like domain	427	500	1.8E-13
ProSiteProfiles	PS51007	Cytochrome c family profile.	IPR009056	Cytochrome c-like domain	288	364	9.653
ProSitePatterns	PS00078	CO II and nitrous oxide reductase dinuclear copper centers signature.	IPR001505	Copper centre Cu(A)	202	250	-
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	473	489	8.0E-6
PRINTS	PR01166	Cytochrome c oxidase subunit II signature			105	125	2.0E-36
Pfam	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	IPR002429	Cytochrome c oxidase subunit II-like C-terminal	131	256	3.2E-33
Gene3D	G3DSA:2.60.40.420		IPR008972	Cupredoxin	127	266	1.4E-77
PRINTS	PR01166	Cytochrome c oxidase subunit II signature			201	221	2.0E-36
Pfam	PF02790	Cytochrome C oxidase subunit II, transmembrane domain	IPR011759	Cytochrome C oxidase subunit II, transmembrane domain	36	116	3.1E-17
ProSiteProfiles	PS51123	OmpA-like domain profile.	IPR006665	OmpA-like domain	415	524	24.407
PRINTS	PR01166	Cytochrome c oxidase subunit II signature			239	256	2.0E-36
Gene3D	G3DSA:1.10.760.10		IPR036909	Cytochrome c-like domain superfamily	270	392	3.9E-25
CDD	cd07185	OmpA_C-like	IPR006665	OmpA-like domain	425	520	1.90095E-15
ProSiteProfiles	PS50857	Cytochrome oxidase subunit II copper A binding domain profile.	IPR002429	Cytochrome c oxidase subunit II-like C-terminal	128	268	37.491
Gene3D	G3DSA:1.10.287.90		IPR036257	Cytochrome C oxidase subunit II, transmembrane domain superfamily	55	126	1.4E-77
SUPERFAMILY	SSF103088		IPR036737	OmpA-like domain superfamily	423	520	1.18E-18
TIGRFAM	TIGR02866	CoxB: cytochrome c oxidase, subunit II	IPR014222	Cytochrome c oxidase, subunit II	44	266	2.3E-57
ProSiteProfiles	PS50999	Cytochrome oxidase subunit II transmembrane region profile.	IPR011759	Cytochrome C oxidase subunit II, transmembrane domain	32	127	17.595
SUPERFAMILY	SSF46626		IPR036909	Cytochrome c-like domain superfamily	266	373	4.87E-23
Pfam	PF13442	Cytochrome C oxidase, cbb3-type, subunit III	IPR009056	Cytochrome c-like domain	290	359	2.0E-11
SUPERFAMILY	SSF49503		IPR008972	Cupredoxin	123	312	2.59E-49
PRINTS	PR01166	Cytochrome c oxidase subunit II signature			127	146	2.0E-36

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.