Burkholderia cenocepacia J2315, BCAL0638

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00126	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00126	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	35	45	2.7E-9
Pfam	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family	IPR000847	Transcription regulator HTH, LysR	9	67	2.1E-18
SUPERFAMILY	SSF53850				101	302	1.43E-39
Gene3D	G3DSA:1.10.10.10		IPR036388	Winged helix-like DNA-binding domain superfamily	8	111	6.7E-21
Gene3D	G3DSA:3.40.190.10				112	295	3.6E-51
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	24	35	2.7E-9
Pfam	PF03466	LysR substrate binding domain	IPR005119	LysR, substrate-binding	101	299	3.4E-36
SUPERFAMILY	SSF46785		IPR036390	Winged helix DNA-binding domain superfamily	5	86	1.19E-20
Gene3D	G3DSA:3.40.190.10				170	268	3.6E-51
ProSiteProfiles	PS50931	LysR-type HTH domain profile.	IPR000847	Transcription regulator HTH, LysR	7	64	27.521
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	45	56	2.7E-9
CDD	cd08432	PBP2_GcdR_TrpI_HvrB_AmpR_like			101	295	1.63142E-65

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.