Burkholderia cenocepacia J2315, BCAL0625
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Rho-independent transcription terminator TERM 261 | 679018 | 679056 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 262 | 679079 | 679113 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 263 | 679085 | 679107 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Inverted repeat (palindrome) of 679082..679093 | 679099 | 679110 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat (palindrome) of 679110..679099 | 679082 | 679093 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat (palindrome) of 680152..680142 | 680069 | 680079 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat (palindrome) of 680072..680081 | 680105 | 680114 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat (palindrome) of 680114..680105 | 680072 | 680081 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat (palindrome) of 679986..679977 | 679917 | 679926 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat (palindrome) of 679917..679926 | 679977 | 679986 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat (palindrome) of 680069..680079 | 680142 | 680152 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Rho-independent transcription terminator TERM 264 | 680215 | 680193 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 265 | 680193 | 680215 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Inverted repeat (palindrome) of 680188..680203 | 680205 | 680220 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat (palindrome) of 680220..680205 | 680188 | 680203 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |