Burkholderia cenocepacia J2315, BCAL0598 (potF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0042597 periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF019574
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0019808 polyamine binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF019574
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015846 polyamine transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF019574
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj02010 ABC transporters 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13416 Bacterial extracellular solute-binding protein IPR006059 Bacterial extracellular solute-binding protein 64 351 8.0E-34
PIRSF PIRSF019574 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein 14 386 3.6E-135
Gene3D G3DSA:3.40.190.10 153 380 2.5E-134
SUPERFAMILY SSF53850 47 385 3.13E-102
CDD cd13659 PBP2_PotF 49 379 1.6439E-171
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein 198 217 2.0E-62
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein 285 304 2.0E-62
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein 175 189 2.0E-62
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein 330 356 2.0E-62
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein 68 89 2.0E-62
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein 111 124 2.0E-62
Gene3D G3DSA:3.40.190.10 50 352 2.5E-134
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein 95 109 2.0E-62
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein 52 68 2.0E-62
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein 235 254 2.0E-62
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein 144 160 2.0E-62

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.