Burkholderia cenocepacia J2315, BCAL0494 (slmA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00440
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | ||
| SUPERFAMILY | SSF48498 | IPR036271 | Tetracyclin repressor-like, C-terminal domain superfamily | 104 | 220 | 4.45E-6 | |
| Pfam | PF00440 | Bacterial regulatory proteins, tetR family | IPR001647 | DNA-binding HTH domain, TetR-type | 46 | 76 | 1.3E-7 |
| ProSiteProfiles | PS50977 | TetR-type HTH domain profile. | IPR001647 | DNA-binding HTH domain, TetR-type | 26 | 86 | 13.494 |
| Gene3D | G3DSA:1.10.357.10 | 27 | 221 | 4.2E-54 | |||
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | ||
| SUPERFAMILY | SSF46689 | IPR009057 | Homeobox-like domain superfamily | 22 | 95 | 5.34E-11 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.