Burkholderia cenocepacia J2315, BCAL0437

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53155
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53155
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00772
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008270 zinc ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02805
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008168 methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02805
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain 187 263 2.0E-12
Gene3D G3DSA:3.30.160.70 172 264 1.2E-28
Pfam PF02805 Metal binding domain of Ada IPR004026 Ada DNA repair, metal-binding 10 74 6.0E-32
Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding 267 345 3.6E-31
Pfam PF12833 Helix-turn-helix domain IPR018060 DNA binding HTH domain, AraC-type 102 180 7.0E-19
Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. IPR023546 Methylated-DNA--protein-cysteine methyltransferase 190 346 34.926
SMART SM00342 IPR018060 DNA binding HTH domain, AraC-type 96 178 1.1E-20
Gene3D G3DSA:1.10.10.60 77 143 6.1E-20
PIRSF PIRSF000409 IPR016221 Bifunctional regulatory protein Ada 1 355 4.1E-148
Gene3D G3DSA:3.40.10.10 IPR035451 Ada-like domain superfamily 1 75 2.2E-33
SUPERFAMILY SSF57884 IPR035451 Ada-like domain superfamily 3 83 9.94E-34
CDD cd06445 ATase IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding 268 345 2.02333E-38
ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site 316 322 -
ProSiteProfiles PS01124 Bacterial regulatory proteins, araC family DNA-binding domain profile. IPR018060 DNA binding HTH domain, AraC-type 84 180 22.03
SUPERFAMILY SSF53155 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily 184 263 1.18E-21
TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding 266 345 9.3E-35
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 265 350 5.6E-34
SUPERFAMILY SSF46767 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain 266 346 1.44E-29
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 82 129 5.82E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.