Burkholderia cenocepacia J2315, BCAL0394 (ung)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006284 base-excision repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd10027
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00130
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004844 uracil DNA N-glycosylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd10027
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd10027
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03410 Base excision repair 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00987 102 266 1.1E-37
SUPERFAMILY SSF52141 IPR036895 Uracil-DNA glycosylase-like domain superfamily 60 278 1.68E-81
TIGRFAM TIGR00628 ung: uracil-DNA glycosylase IPR002043 Uracil-DNA glycosylase family 1 61 269 6.0E-75
MobiDBLite mobidb-lite consensus disorder prediction 1 41 -
ProSitePatterns PS00130 Uracil-DNA glycosylase signature. IPR018085 Uracil-DNA glycosylase, active site 110 119 -
CDD cd10027 UDG_F1 IPR002043 Uracil-DNA glycosylase family 1 73 276 1.97585E-122
SMART SM00986 IPR005122 Uracil-DNA glycosylase-like 102 266 1.1E-37
Hamap MF_00148 Uracil-DNA glycosylase [ung]. IPR002043 Uracil-DNA glycosylase family 1 59 277 37.427
Pfam PF03167 Uracil DNA glycosylase superfamily IPR005122 Uracil-DNA glycosylase-like 106 265 8.5E-21
Gene3D G3DSA:3.40.470.10 IPR036895 Uracil-DNA glycosylase-like domain superfamily 53 282 7.1E-88

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.