Burkholderia cenocepacia J2315, BCAL0374 (prfA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006415 translational termination
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03462
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003747 translation release factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00745
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016149 translation release factor activity, codon specific
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00019
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF03462 PCRF domain IPR005139 Peptide chain release factor 13 203 7.2E-71
Hamap MF_00093 Peptide chain release factor 1 [prfA]. IPR004373 Peptide chain release factor 1 5 357 40.858
TIGRFAM TIGR00019 prfA: peptide chain release factor 1 IPR004373 Peptide chain release factor 1 1 356 1.2E-162
Coils Coil 75 95 -
SUPERFAMILY SSF75620 12 353 3.79E-135
Pfam PF00472 RF-1 domain IPR000352 Peptide chain release factor class I 214 321 3.6E-42
ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. IPR000352 Peptide chain release factor class I 228 244 -
Coils Coil 2 29 -
Gene3D G3DSA:3.30.70.1660 112 341 1.5E-97
SMART SM00937 IPR005139 Peptide chain release factor 63 178 1.3E-64
Gene3D G3DSA:3.30.160.20 210 297 1.5E-97

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.