Burkholderia cenocepacia J2315, BCAL0254 (secY)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0015031	protein transport	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR00967	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR00967	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bcj03070	Bacterial secretion system	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	bcj03060	Protein export	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00303	Preprotein translocase SecY subunit signature			270	289	7.8E-94
PRINTS	PR00303	Preprotein translocase SecY subunit signature			373	391	7.8E-94
PRINTS	PR00303	Preprotein translocase SecY subunit signature			24	42	7.8E-94
PRINTS	PR00303	Preprotein translocase SecY subunit signature			152	177	7.8E-94
SUPERFAMILY	SSF103491		IPR023201	SecY domain superfamily	13	427	7.45E-131
ProSitePatterns	PS00756	Protein secY signature 2.	IPR030659	SecY conserved site	171	188	-
Gene3D	G3DSA:1.10.3370.10		IPR023201	SecY domain superfamily	11	432	2.8E-161
Pfam	PF00344	SecY translocase	IPR002208	SecY/SEC61-alpha family	77	420	1.7E-114
PRINTS	PR00303	Preprotein translocase SecY subunit signature			405	423	7.8E-94
Hamap	MF_01465	Protein translocase subunit SecY [secY].	IPR026593	Protein translocase subunit SecY	11	436	29.586
PRINTS	PR00303	Preprotein translocase SecY subunit signature			117	140	7.8E-94
PRINTS	PR00303	Preprotein translocase SecY subunit signature			76	96	7.8E-94
PIRSF	PIRSF004557		IPR002208	SecY/SEC61-alpha family	11	443	1.3E-127
PRINTS	PR00303	Preprotein translocase SecY subunit signature			318	340	7.8E-94
ProSitePatterns	PS00755	Protein secY signature 1.	IPR030659	SecY conserved site	77	96	-
PRINTS	PR00303	Preprotein translocase SecY subunit signature			178	201	7.8E-94
TIGRFAM	TIGR00967	3a0501s007: preprotein translocase, SecY subunit	IPR002208	SecY/SEC61-alpha family	21	432	1.5E-129

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.