Burkholderia cenocepacia J2315, BCAL0252 (rpmD)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0015934	large ribosomal subunit	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF002211	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006412	translation	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF002211	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003735	structural constituent of ribosome	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF002211	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bcj03010	Ribosome	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
TIGRFAM	TIGR01308	rpmD_bact: ribosomal protein uL30	IPR005996	Ribosomal protein L30, bacterial-type	6	59	5.3E-24
Gene3D	G3DSA:3.30.1390.20		IPR036919	Ribosomal protein L30, ferredoxin-like fold domain superfamily	2	59	2.5E-24
PIRSF	PIRSF002211		IPR005996	Ribosomal protein L30, bacterial-type	1	60	3.7E-28
SUPERFAMILY	SSF55129		IPR036919	Ribosomal protein L30, ferredoxin-like fold domain superfamily	4	58	1.02E-19
CDD	cd01658	Ribosomal_L30	IPR005996	Ribosomal protein L30, bacterial-type	6	58	5.61399E-22
Hamap	MF_01371_B	50S ribosomal protein L30 [rpmD].	IPR005996	Ribosomal protein L30, bacterial-type	3	60	20.16
Pfam	PF00327	Ribosomal protein L30p/L7e	IPR016082	Ribosomal protein L30, ferredoxin-like fold domain	6	56	5.7E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.