Burkholderia cenocepacia J2315, BCAL0242 (rpmC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00831
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00831
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00831
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03010 Ribosome 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00831 Ribosomal L29 protein IPR001854 Ribosomal protein L29/L35 4 60 2.8E-19
TIGRFAM TIGR00012 L29: ribosomal protein uL29 IPR001854 Ribosomal protein L29/L35 5 60 2.0E-18
ProSitePatterns PS00579 Ribosomal protein L29 signature. IPR018254 Ribosomal protein L29, conserved site 39 53 -
SUPERFAMILY SSF46561 IPR036049 Ribosomal protein L29/L35 superfamily 1 61 7.72E-19
Hamap MF_00374 50S ribosomal protein L29 [rpmC]. IPR001854 Ribosomal protein L29/L35 1 60 16.597
Coils Coil 4 24 -
CDD cd00427 Ribosomal_L29_HIP 4 60 4.58205E-15
Gene3D G3DSA:1.10.287.310 1 62 2.1E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.