Burkholderia cenocepacia J2315, BCAL0241 (rplP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.90.1170.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0019843 rRNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00060
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.90.1170.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.90.1170.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03010 Ribosome 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 IPR000114 Ribosomal protein L16 2 126 1.4E-59
Hamap MF_01342 50S ribosomal protein L16 [rplP]. IPR000114 Ribosomal protein L16 1 134 38.812
PRINTS PR00060 Ribosomal protein L16 signature IPR000114 Ribosomal protein L16 24 36 2.0E-39
PRINTS PR00060 Ribosomal protein L16 signature IPR000114 Ribosomal protein L16 42 53 2.0E-39
Pfam PF00252 Ribosomal protein L16p/L10e IPR016180 Ribosomal protein L10e/L16 4 132 1.9E-48
MobiDBLite mobidb-lite consensus disorder prediction 1 24 -
CDD cd01433 Ribosomal_L16_L10e IPR016180 Ribosomal protein L10e/L16 23 132 1.2948E-48
ProSitePatterns PS00586 Ribosomal protein L16 signature 1. IPR020798 Ribosomal protein L16, conserved site 59 70 -
SUPERFAMILY SSF54686 IPR036920 Ribosomal protein L10e/L16 superfamily 1 134 4.97E-54
PRINTS PR00060 Ribosomal protein L16 signature IPR000114 Ribosomal protein L16 58 87 2.0E-39
PRINTS PR00060 Ribosomal protein L16 signature IPR000114 Ribosomal protein L16 88 117 2.0E-39
Gene3D G3DSA:3.90.1170.10 IPR036920 Ribosomal protein L10e/L16 superfamily 1 137 4.4E-55

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.