Burkholderia cenocepacia J2315, BCAL0238 (rpsS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF54570
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF54570
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0015935 small ribosomal subunit
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01050
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00323
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF54570
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03010 Ribosome 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 IPR005732 Ribosomal protein S19, bacterial-type 1 91 1.7E-45
Pfam PF00203 Ribosomal protein S19 IPR002222 Ribosomal protein S19/S15 3 83 2.3E-37
PRINTS PR00975 Ribosomal protein S19 family signature IPR002222 Ribosomal protein S19/S15 53 65 6.1E-24
SUPERFAMILY SSF54570 IPR023575 Ribosomal protein S19, superfamily 3 84 3.53E-35
PRINTS PR00975 Ribosomal protein S19 family signature IPR002222 Ribosomal protein S19/S15 33 52 6.1E-24
ProSitePatterns PS00323 Ribosomal protein S19 signature. IPR020934 Ribosomal protein S19 conserved site 53 77 -
Gene3D G3DSA:3.30.860.10 IPR023575 Ribosomal protein S19, superfamily 1 91 2.1E-42
Hamap MF_00531 30S ribosomal protein S19 [rpsS]. IPR002222 Ribosomal protein S19/S15 1 89 25.811
PRINTS PR00975 Ribosomal protein S19 family signature IPR002222 Ribosomal protein S19/S15 65 80 6.1E-24
PIRSF PIRSF002144 IPR002222 Ribosomal protein S19/S15 1 91 2.4E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.