Burkholderia cenocepacia J2315, BCAL0235a (rplD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF52166
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF52166
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF52166
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03010 Ribosome 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. IPR013005 50S ribosomal protein uL4 8 206 30.92
MobiDBLite mobidb-lite consensus disorder prediction 46 77 -
SUPERFAMILY SSF52166 IPR023574 Ribosomal protein L4 domain superfamily 1 205 5.49E-68
TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 IPR013005 50S ribosomal protein uL4 17 203 2.3E-68
MobiDBLite mobidb-lite consensus disorder prediction 47 61 -
Pfam PF00573 Ribosomal protein L4/L1 family IPR002136 Ribosomal protein L4/L1e 19 203 8.7E-59
Gene3D G3DSA:3.40.1370.10 IPR023574 Ribosomal protein L4 domain superfamily 2 206 7.7E-63

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.