Burkholderia pseudomallei 1106a, BURPS1106A_A2074 (bipB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01375
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009405 pathogenesis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01375
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005576 extracellular region
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01375
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil 150 170 -
Pfam PF16535 Type III cell invasion protein SipB IPR032391 Invasin IpaB, N-terminal 99 261 1.1E-46
Gene3D G3DSA:1.20.120.330 98 260 4.0E-11
Coils Coil 578 598 -
Coils Coil 174 194 -
Pfam PF04888 Secretion system effector C (SseC) like family IPR006972 Secretion system effector C, SseC-like 286 616 3.4E-78
PRINTS PR01375 Salmonella/Shigella invasin protein B signature IPR003895 Type III secretion system, invasin protein B 325 344 4.7E-11
Coils Coil 118 138 -
Coils Coil 315 338 -
PRINTS PR01375 Salmonella/Shigella invasin protein B signature IPR003895 Type III secretion system, invasin protein B 292 312 4.7E-11
PRINTS PR01375 Salmonella/Shigella invasin protein B signature IPR003895 Type III secretion system, invasin protein B 568 586 4.7E-11
Coils Coil 201 228 -
MobiDBLite mobidb-lite consensus disorder prediction 64 79 -
MobiDBLite mobidb-lite consensus disorder prediction 58 95 -
PRINTS PR01375 Salmonella/Shigella invasin protein B signature IPR003895 Type III secretion system, invasin protein B 536 553 4.7E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.