Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0045226 | extracellular polysaccharide biosynthetic process |
Inferred from Sequence or Structural Similarity
Term mapped from: BGD:Bcep1808_4472
|
ECO:0000250 sequence similarity evidence used in manual assertion |
19948863 | Reviewed by curator |
Biological Process | GO:0045226 | extracellular polysaccharide biosynthetic process |
Inferred from Sequence or Structural Similarity
Term mapped from: GenBank:AFR13036.1
|
ECO:0000250 sequence similarity evidence used in manual assertion |
23460819 | Reviewed by curator |
Molecular Function | GO:0008446 | GDP-mannose 4,6-dehydratase activity |
Inferred from Sequence or Structural Similarity
Term mapped from: GenBank:AFR13036.1
|
ECO:0000250 sequence similarity evidence used in manual assertion |
23460819 | Reviewed by curator |
Biological Process | GO:0019673 | GDP-mannose metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00955
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0008446 | GDP-mannose 4,6-dehydratase activity |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00955
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
MetaCyc | GDP-L-fucose biosynthesis I (from GDP-D-mannose) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | GDP-mycosamine biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | GDP-6-deoxy-D-talose biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
KEGG (InterPro) | 00051 | Fructose and mannose metabolism | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
|
KEGG | bmu01100 | Metabolic pathways - Burkholderia multivorans ATCC 17616 (JGI) | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | bmu00051 | Fructose and mannose metabolism - Burkholderia multivorans ATCC 17616 (JGI) | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
MetaCyc | GDP-D-perosamine biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
MetaCyc | GDP-L-colitose biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
KEGG (InterPro) | 00520 | Amino sugar and nucleotide sugar metabolism | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
|
KEGG | bmu00520 | Amino sugar and nucleotide sugar metabolism - Burkholderia multivorans ATCC 17616 (JGI) | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
TIGRFAM | TIGR01472 | gmd: GDP-mannose 4,6-dehydratase | IPR006368 | GDP-mannose 4,6-dehydratase | 6 | 339 | 4.0E-143 |
Gene3D | G3DSA:3.40.50.720 | 7 | 324 | 2.4E-146 | |||
CDD | cd05260 | GDP_MD_SDR_e | 6 | 338 | 1.12051E-168 | ||
Gene3D | G3DSA:3.90.25.10 | 190 | 338 | 2.4E-146 | |||
SUPERFAMILY | SSF51735 | IPR036291 | NAD(P)-binding domain superfamily | 5 | 337 | 5.67E-72 | |
Pfam | PF16363 | GDP-mannose 4,6 dehydratase | IPR016040 | NAD(P)-binding domain | 8 | 333 | 2.6E-135 |
Hamap | MF_00955 | GDP-mannose 4,6-dehydratase [gmd]. | IPR006368 | GDP-mannose 4,6-dehydratase | 5 | 343 | 52.087 |