Burkholderia cenocepacia MC0-3, Bcenmc03_5576 (cepR)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46894	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46894	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00421	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00421	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF75516		IPR036693	Transcription factor LuxR-like, autoinducer-binding domain superfamily	4	166	2.09E-40
ProSitePatterns	PS00622	LuxR-type HTH domain signature.	IPR000792	Transcription regulator LuxR, C-terminal	190	217	-
Pfam	PF00196	Bacterial regulatory proteins, luxR family	IPR000792	Transcription regulator LuxR, C-terminal	175	230	7.3E-21
SMART	SM00421		IPR000792	Transcription regulator LuxR, C-terminal	173	230	8.8E-26
SUPERFAMILY	SSF46894		IPR016032	Signal transduction response regulator, C-terminal effector	159	237	7.82E-22
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	190	206	3.3E-12
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	206	218	3.3E-12
Pfam	PF03472	Autoinducer binding domain	IPR005143	Transcription factor LuxR-like, autoinducer-binding domain	18	157	1.1E-30
Gene3D	G3DSA:1.10.10.10		IPR036388	Winged helix-like DNA-binding domain superfamily	169	237	2.0E-31
Gene3D	G3DSA:3.30.450.80		IPR036693	Transcription factor LuxR-like, autoinducer-binding domain superfamily	3	168	5.4E-53
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	176	190	3.3E-12
ProSiteProfiles	PS50043	LuxR-type HTH domain profile.	IPR000792	Transcription regulator LuxR, C-terminal	169	234	33.043
CDD	cd06170	LuxR_C_like	IPR000792	Transcription regulator LuxR, C-terminal	176	232	6.18666E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.