Burkholderia thailandensis E264 ATCC 700388, BTH_II2095 (malI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50621
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008836 diaminopimelate decarboxylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01181
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009089 lysine biosynthetic process via diaminopimelate
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01181
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bte01120 Microbial metabolism in diverse environments 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bte01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bte01230 Biosynthesis of amino acids 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc L-lysine biosynthesis III InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00300 Lysine biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bte01130 Biosynthesis of antibiotics 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bte00300 Lysine biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc L-lysine biosynthesis VI InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc L-lysine biosynthesis II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bte01110 Biosynthesis of secondary metabolites 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature IPR000183 Ornithine/DAP/Arg decarboxylase 104 116 7.0E-10
PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature IPR000183 Ornithine/DAP/Arg decarboxylase 294 313 7.0E-10
SUPERFAMILY SSF50621 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal 279 416 2.09E-30
PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature IPR000183 Ornithine/DAP/Arg decarboxylase 393 406 7.0E-10
PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature IPR000183 Ornithine/DAP/Arg decarboxylase 83 101 7.0E-10
Gene3D G3DSA:3.20.20.10 IPR029066 PLP-binding barrel 57 299 2.5E-79
Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal 67 303 2.1E-27
PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature IPR000183 Ornithine/DAP/Arg decarboxylase 215 228 7.0E-10
SUPERFAMILY SSF51419 IPR029066 PLP-binding barrel 56 307 3.11E-44
PRINTS PR01181 Diaminopimelate decarboxylase signature IPR002986 Diaminopimelate decarboxylase, LysA 190 199 2.8E-5
PRINTS PR01181 Diaminopimelate decarboxylase signature IPR002986 Diaminopimelate decarboxylase, LysA 322 340 2.8E-5
PRINTS PR01181 Diaminopimelate decarboxylase signature IPR002986 Diaminopimelate decarboxylase, LysA 102 119 2.8E-5
Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal 304 393 9.1E-13
Gene3D G3DSA:2.40.37.10 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal 38 414 2.5E-79

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.