Burkholderia thailandensis E264 ATCC 700388, BTH_II1284

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50294
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.130.10.10 IPR015943 WD40/YVTN repeat-like-containing domain superfamily 202 454 8.7E-14
Gene3D G3DSA:2.130.10.10 IPR015943 WD40/YVTN repeat-like-containing domain superfamily 455 560 5.7E-17
SMART SM00320 IPR001680 WD40 repeat 399 436 29.0
SMART SM00320 IPR001680 WD40 repeat 1 32 8.0
SMART SM00320 IPR001680 WD40 repeat 35 73 0.019
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile. IPR001680 WD40 repeat 124 165 12.881
SMART SM00320 IPR001680 WD40 repeat 76 115 3.1E-4
SMART SM00320 IPR001680 WD40 repeat 198 237 0.1
Pfam PF00400 WD domain, G-beta repeat IPR001680 WD40 repeat 52 72 0.021
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile. IPR001680 WD40 repeat 41 82 10.375
Pfam PF00400 WD domain, G-beta repeat IPR001680 WD40 repeat 488 519 0.0061
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile. IPR001680 WD40 repeat 487 519 9.439
SMART SM00320 IPR001680 WD40 repeat 524 561 160.0
Pfam PF00400 WD domain, G-beta repeat IPR001680 WD40 repeat 118 155 1.4E-4
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile. IPR001680 WD40 repeat 205 238 10.442
SUPERFAMILY SSF50998 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily 4 520 9.42E-47
ProSiteProfiles PS50294 Trp-Asp (WD) repeats circular profile. IPR017986 WD40-repeat-containing domain 1 246 24.099
SMART SM00320 IPR001680 WD40 repeat 480 519 5.1E-4
ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. IPR019775 WD40 repeat, conserved site 19 33 -
SMART SM00320 IPR001680 WD40 repeat 117 156 1.8E-6
SUPERFAMILY SSF63829 176 377 4.05E-9
Gene3D G3DSA:2.130.10.10 IPR015943 WD40/YVTN repeat-like-containing domain superfamily 1 201 4.7E-41
Pfam PF00400 WD domain, G-beta repeat IPR001680 WD40 repeat 94 115 0.016
SMART SM00320 IPR001680 WD40 repeat 439 478 0.13
ProSiteProfiles PS50294 Trp-Asp (WD) repeats circular profile. IPR017986 WD40-repeat-containing domain 487 565 11.866
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile. IPR001680 WD40 repeat 83 115 9.172
CDD cd00200 WD40 4 237 3.26824E-41
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile. IPR001680 WD40 repeat 1 41 10.609

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.